Identifying Context-Specific Cell-Cell Interaction Genes Without Ligand-Receptor Databases from Spatial Transcriptomics
Hyobin Kim, B. J. Park, Junghyun Jung, S W Lee, Sanaz Panahandeh, Soyoung Kwon, Jingyi Jessica Li, Esha Madan, Dongha Kim, Junil Kim, Rajan Gogna, Kyoung Jae Won
CellNeighborEX v2 identifies context-specific cell-cell interaction genes from spatial transcriptomics data without relying on ligand-receptor databases.
bioRxiv · May 12, 2026 · PreprintBioinformatics