Junghyun Jung

The paper evaluates the reliability of confidence measures from single-cell models on new data and shows that raw confidence scores are unreliable, requiring recalibration with target-specific labels.

CellNeighborEX v2 identifies context-specific cell-cell interaction genes from spatial transcriptomics data without relying on ligand-receptor databases.

PersonaAI generates and validates aging-related hypotheses using literature and single-cell RNA-seq data, identifying novel aging mechanisms.

This study benchmarks 12 HLA callers on RNA-seq data across 682 samples to evaluate accuracy, computational cost, and performance differences by ancestry.

This study identifies 136 genes/eRNA/proteins associated with ischemic stroke risk using integrative transcriptome-wide association analysis across multiple tissues and finds potential therapeutic candidates.

FactorGo identifies pleiotropic components across thousands of human diseases and traits using GWAS summary statistics, outperforming existing methods in capturing latent factors.

The paper investigates the association of rare loss-of-function variants in type I IFN immunity genes with severe COVID-19 and finds no significant association.

This paper introduces MARS, a statistical method that improves GWAS power by considering multiple causal variants, and shows it identifies more eGenes and association loci than existing methods.