Author

Baochen Shi

University of California, Los Angeles

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Atsushi NakanoiD· 1 shared Bao Ying CheniD· 1 shared Cesar A Perez· 1 shared Ching‐Ling LieniD· 1 shared Emily CurdiD· 1 shared Gaurav S. KandlikariD· 1 shared Haruko NakanoiD· 1 shared Heather R. ChristofkiD· 1 shared

Activity by Year

2019-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperDevelopmental Biology

Atsushi NakanoORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Glucose metabolism promotes neonatal heart regeneration

Viviana M. Fajardo, Iris Feng, Bao Ying Chen, Cesar A Perez, Baochen Shi, Peter M. Clark, Rong Tian, Ching‐Ling Lien, Matteo A. Pellegrini, Heather R. Christofk, Haruko Nakano, Atsushi Nakano

This study shows that glucose metabolism enhances neonatal heart regeneration by increasing glucose uptake, glycogen storage, and cardiomyocyte proliferation in mice.

bioRxiv · Dec 9, 2019 · PreprintDevelopmental Biology

Anacapa Toolkit: an environmental DNA toolkit for processing multilocus metabarcode datasets

Emily Curd, Zachary J. Gold, Gaurav S. Kandlikar, Jesse Gomer, Max Ogden, Taylor O’Connell, Lenore Pipes, Teia M. Schweizer, Laura Rabichow, Meixi Lin, Baochen Shi, Paul Henry Barber, Nathan J. B. Kraft, Robert K. Wayne, Rachel Sarah Meyer

The paper introduces Anacapa, a toolkit for processing multilocus eDNA metabarcoding data, enabling comprehensive reference database creation and accurate taxonomic assignment.

Methods in Ecology and Evolution · May 24, 2019Peer-reviewedBioinformatics