Author

Bencong Zhu

The University of Texas at Dallas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:Bayesian inference· 3 Assay:spatial transcriptomics· 3 Research Focus:clustering· 2 Research Focus:spatial domain detection· 2 Research Focus:cell type annotation· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Lin XuiD· 3 shared Qiwei LiiD· 3 shared Huimin LiiD· 2 shared Xi JiangiD· 2 shared Chen TangiD· 1 shared Guanghua XiaoiD· 1 shared Lei Ming GuoiD· 1 shared Ruichen RongiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersBioinformatics

Lin XuORCID

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3 papers

Recent·Most cited

Robust Bayesian Integrative Modeling of Single Cell and Spatially Resolved Transcriptomics Data

Huimin Li, Bencong Zhu, Xi Jiang, Ying Ma, Lin Xu, Qiwei Li

This paper introduces iMOSCATO, a Bayesian model that integrates single-cell RNA-seq and spatial transcriptomics data to decompose cell-type compositions and detect spatial domains.

bioRxiv · Apr 22, 2025 · PreprintBioinformatics

BayeSMART: Bayesian Clustering of Multi-sample Spatially Resolved Transcriptomics Data

Yanghong Guo, Bencong Zhu, Chen Tang, Ruichen Rong, Ying Ma, Guanghua Xiao, Lin Xu, Qiwei Li

BayeSMART improves multi-sample spatial clustering by integrating AI-reconstructed single-cell data with spatial context, outperforming existing methods in accuracy and efficiency.

Briefings in Bioinformatics · Sep 23, 2024Peer-reviewedBioinformatics

An Interpretable Bayesian Clustering Approach with Feature Selection for Analyzing Spatially Resolved Transcriptomics Data

Huimin Li, Bencong Zhu, Xi Jiang, Lei Ming Guo, Yang Xie, Lin Xu, Qiwei Li

The paper introduces a Bayesian clustering method with feature selection for spatially resolved transcriptomics data, improving accuracy through a zero-inflated negative binomial model and geospatial integration.

Biometrics · Jul 1, 2024Peer-reviewedBioinformatics