Quantifying data reuse in proteomics using PRIDE downloads statistics and a semi-supervised LLM-based framework
Suresh Hewapathirana, Jingwen Bai, Chakradhar Bandla, Selvakumar Kamatchinathan, Deepti J Kundu, Nithu Sara John, Boma Brown-Harry, Nandana Madhusoodanan, Joan Marc Riera Duocastella, Juan Antonio Vizcaíno, Yasset Pérez‐Riverol
The paper analyzes proteomics dataset reuse using PRIDE download statistics and a semi-supervised LLM-based framework to classify download sources.
bioRxiv · Apr 23, 2026 · PreprintBioinformatics