Author

Brad A. Chapman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

C. Victor Jongeneel· 1 shared Gloria Rendon· 1 shared Liudmila S. Mainzer· 1 shared Oliver Hofmann· 1 shared Zachary D. Stephens· 1 shared

Activity by Year

2015-2015 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

C. Victor Jongeneel

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1 paper

Recent·Most cited

Validation of Illumina’s Isaac variant calling workflow

Liudmila S. Mainzer, Brad A. Chapman, Oliver Hofmann, Gloria Rendon, Zachary D. Stephens, C. Victor Jongeneel

This paper evaluates Illumina's Isaac variant calling workflow, finding it fast with improved accuracy but noting high false positives in exomes and inability to reproduce claimed 99% sensitivity and specificity.

bioRxiv · Nov 26, 2015 · PreprintBioinformatics