Perturbation-Aware Neural ODE (pNODE) Learns Microbiome Dynamics from Clinical Data and Predicts Gut-Borne Bloodstream Infections in Patients Receiving Cancer Treatment
Isaac Stamper, Brendan Aeria, João B. Xavier
The paper introduces pNODE, a model that predicts gut microbiome dynamics and bloodstream infections in cancer patients using clinical data and antibiotic perturbations.
bioRxiv · Nov 26, 2025 · PreprintBioinformatics