Author

Brian J. Arnold

Princeton University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Benjamin J. RaphaeliD· 1 shared Cong MaiD· 1 shared Hirak SarkariD· 1 shared Kohei SannoiD· 1 shared Sereno L. Lopez-Darwin· 1 shared Uthsav ChitraiD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperBioinformatics

Benjamin J. RaphaelORCID

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1 paper

Recent·Most cited

Mapping the topography of spatial gene expression with interpretable deep learning

Uthsav Chitra, Brian J. Arnold, Hirak Sarkar, Kohei Sanno, Cong Ma, Sereno L. Lopez-Darwin, Benjamin J. Raphael

This paper introduces GASTON, an interpretable deep learning method to map spatial gene expression topography, identifying gradients and domains in spatial transcriptomics data.

Nature Methods · Jan 23, 2025Peer-reviewedBioinformatics