C. C. Weber

Ambiguity coding allows accurate inference of evolutionary parameters from alignments in an aggregated state-space

This paper shows how ambiguity coding in alignments allows accurate inference of evolutionary parameters like selection strength and ancestral structures from incomplete data.

Physicochemical amino acid properties better describe substitution rates in large populations

The paper introduces a parametric codon model that distinguishes radical and conservative amino acid substitutions, finding better fit in large populations but not smaller ones.

Protein Evolution Depends On Multiple Distinct Population Size Parameters

The paper reviews how different population size parameters influence protein evolution and emphasizes the need for clear definitions to improve models of protein evolution.