Author

C. Vlachos

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Research Focus:variant effect prediction· 2 Approach:benchmark study· 1 Research Focus:chromatin & epigenetic regulation· 1 Organism:Drosophila· 1 Approach:simulation· 1 Approach:statistical model· 1

Frequent Co-Authors

R. Kofler· 3 shared A. Futschik· 1 shared C. Burny· 1 shared C. Schloetterer· 1 shared D. Selvaraju· 1 shared L. Weilguny· 1 shared M. Pelizzola· 1 shared R. Borges· 1 shared

Activity by Year

2019-2019 · peak 3/yr

Co-Author Collaboration Network

8 top collaborators · 18 mutual co-author links

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3 shared papersEvolutionary Biology

R. Kofler

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3 papers

Recent·Most cited

Reconstructing the invasion route of DNA transposons using extant population samples

L. Weilguny, C. Vlachos, D. Selvaraju, R. Kofler

This paper introduces a method to reconstruct DNA transposon invasion routes using extant population samples and TE sequences, validated on Drosophila melanogaster.

bioRxiv · Aug 8, 2019 · PreprintEvolutionary Biology

Benchmarking software tools for detecting and quantifying selection in Evolve and Resequencing studies

C. Vlachos, C. Burny, M. Pelizzola, R. Borges, A. Futschik, R. Kofler, C. Schloetterer

This study benchmarks 10 software tools for detecting selection in Evolve and Resequencing studies, finding that LRT-1 performs best across scenarios.

bioRxiv · May 17, 2019Evolutionary Biology

Optimizing the power to identify the genetic basis of complex traits with Evolve and Resequence studies

C. Vlachos, R. Kofler

This study shows that gradually increasing truncating selection in Evolve and Resequence experiments maximizes power to identify causative alleles without extra cost, outperforming GWAS in some cases.

bioRxiv · Mar 20, 2019Evolutionary Biology