Author

C. W. Nelson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Organism:human· 1 Research Focus:sequence-to-function modeling· 1 Research Focus:variant calling· 1

Frequent Co-Authors

X. Wei· 2 shared Z. Ardern· 2 shared C. Ludwig· 1 shared C. Meng· 1 shared C.-H. Kuo· 1 shared S.-O. Kolokotronis· 1 shared T. L. Goldberg· 1 shared W.-H. Li· 1 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 22 mutual co-author links

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2 shared papersEvolutionary Biology

X. Wei

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3 papers

Recent·Most cited

Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic

C. W. Nelson, Z. Ardern, T. L. Goldberg, C. Meng, C.-H. Kuo, C. Ludwig, S.-O. Kolokotronis, X. Wei

The paper identifies and characterizes ORF3d, a novel overlapping gene in SARS-CoV-2, showing its presence in pangolin-CoVs and its evolutionary significance.

bioRxiv · May 21, 2020Evolutionary Biology

OLGenie: Estimating Natural Selection to Predict Functional Overlapping Genes

C. W. Nelson, Z. Ardern, X. Wei

OLGenie estimates natural selection in overlapping genes to identify functionally constrained gene pairs with high accuracy.

bioRxiv · Dec 14, 2019Evolutionary Biology

Trevolver: simulating non-reversible DNA sequence evolution in trinucleotide context on a bifurcating tree

C. W. Nelson, Y.-X. Fu, W.-H. Li

Trevolver simulates non-reversible DNA sequence evolution with trinucleotide context dependence on bifurcating trees, enabling testing of neutral evolutionary hypotheses across multiple biological contexts.

bioRxiv · Jun 18, 2019 · PreprintEvolutionary Biology