Author

Caleb J. Kennedy

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Cynthia Vierra‐Green· 1 shared Daniel Valiga· 1 shared Hu HuangiD· 1 shared Hwa Ran Kim· 1 shared Jane Pollack· 1 shared Jill A Hollenbach· 1 shared Joel Schneider· 1 shared Kathryn J Doroschak· 1 shared

Activity by Year

2015-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Cynthia Vierra‐Green

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2 papers

Recent·Most cited

Iterative feature selection method to discover predictive variables and interactions for high-dimensional transplant genomic data

Hu Huang, Cynthia Vierra‐Green, Stephen Spellman, Caleb J. Kennedy

The paper introduces an iterative feature selection method to identify predictive SNPs and their interactions in high-dimensional transplant genomic data, showing it can reduce SNP sets to less than 0.05%.

bioRxiv · Apr 18, 2019 · PreprintBioinformatics

Histoimmunogenetics Markup Language 1.0: Reporting Next Generation Sequencing-based HLA and KIR Genotyping

Robert P Milius, Michael Heuer, Daniel Valiga, Kathryn J Doroschak, Caleb J. Kennedy, Yung-Tsi Bolon, Joel Schneider, Jane Pollack, Hwa Ran Kim, Nezih Cereb, Jill A Hollenbach, Steven J Mack, Martin Maiers

The paper introduces an updated Histoimmunogenetics Markup Language (HML) format for NGS-based HLA and KIR genotyping, enhancing data exchange and reporting with new XML structures and genotype ambiguity representation.

Human Immunology · Dec 1, 2015Peer-reviewedBioinformatics