Author

Carlos P. Sosa

Mayo Clinic

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

Bill Long· 1 shared Brian Haas· 1 shared Chen WangiD· 1 shared Jean-Pierre KocheriD· 1 shared Jef Dawson· 1 shared Jie NaiD· 1 shared Melissa C. LarsoniD· 1 shared Nicholas Bradley LarsoniD· 1 shared

Activity by Year

2015-2019 · peak 1/yr

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10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Bill Long

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2 papers

Recent·Most cited

BioinformaticsPacific Symposium on Biocomputing (PSB)Peer-reviewedNov 27, 2019

Coverage profile correction of shallow-depth circulating cell free DNA sequencing via multi-distance learning

Nicholas Bradley Larson, Melissa C. Larson, Jie Na…·Ross A. Rowsey

This paper improves coverage profile correction in shallow-depth ccfDNA WGS using multi-distance learning, reducing variability and improving trisomy screening performance.

6 citations

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintApr 7, 2015

The Impact of High-Performance Computing Best Practice Applied to Next-Generation Sequencing Workflows

Pierre Carrier, Bill Long, Richard Walsh…·Thomas William

This paper demonstrates how distributed-memory parallelism improves NGS workflow performance and resource utilization using the Inchworm module of the Trinity RNA-Seq pipeline.

DOI 10.1101/017665

mousezebrafish

𝕏 PostBluesky