Author

Chanakya Ekbote

École Polytechnique Fédérale de Lausanne

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

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Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:imputation· 1 Organism:mouse· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Albert Dominguez MantesiD· 1 shared Antonio HerreraiD· 1 shared Gioele La MannoiD· 1 shared Hilal Ahmed LashueliD· 1 shared Jiashuo FaniD· 1 shared Maria BrbićiD· 1 shared Nikita MorozoviD· 1 shared Pascal Frossard BiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Albert Dominguez MantesORCID

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1 paper

Recent·Most cited

Tissue Reconstruction with Generative AI

Tingyang Yu, Chanakya Ekbote, Nikita Morozov, Antonio Herrera, Jiashuo Fan, Albert Dominguez Mantes, Salvatore Novello, Hilal Ahmed Lashuel, Pascal Frossard B, Stéphane d’Ascoli, Gioele La Manno, Maria Brbić

LUNA reconstructs tissue architecture from dissociated single-cell RNA-seq data using spatial priors learned from spatial transcriptomics, validating on mouse brain datasets and disease models.

bioRxiv · Feb 13, 2025 · PreprintBioinformatics