Author

Chang Sik Kim

Science and Technology Facilities Council

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Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Approach:matrix factorization· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Kirk E. JordaniD· 1 shared Martyn WinniD· 1 shared Vipin SachdevaiD· 1 shared

Activity by Year

2017-2017 · peak 1/yr

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1 shared paperBioinformatics

Kirk E. JordanORCID

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1 paper

Recent·Most cited

K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity

Chang Sik Kim, Martyn Winn, Vipin Sachdeva, Kirk E. Jordan

The paper introduces a MapReduce-based k-mer clustering method to parallelize the Inchworm module of Trinity, reducing runtime and memory usage in transcriptome assembly.

BMC Bioinformatics · Nov 3, 2017Peer-reviewedBioinformatics