Author

Vipin Sachdeva

IBM Research - Cambridge (United States)ORCID 0000-0001-7914-0185Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Approach:matrix factorization· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

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Chang Sik Kim· 1 shared Kirk E. JordaniD· 1 shared Martyn WinniD· 1 shared

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2017-2017 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Chang Sik Kim

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1 paper

Recent·Most cited

BioinformaticsBMC BioinformaticsPeer-reviewedNov 3, 2017

K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity

Chang Sik Kim, Martyn Winn, Vipin Sachdeva, Kirk E. Jordan

The paper introduces a MapReduce-based k-mer clustering method to parallelize the Inchworm module of Trinity, reducing runtime and memory usage in transcriptome assembly.

20 citations

whole-genome sequencingstatistical model

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