Author

Chloe Cummins

Middle Tennessee State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1 Research Focus:gene regulatory network inference· 1 Organism:multiple species· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander J. Rurik· 2 shared Donald M. WalkeriD· 2 shared Jason W. DallasiD· 2 shared Lluvia Vargas‐GastélumiD· 2 shared Mitra GhotbiiD· 2 shared N. Reed AlexanderiD· 2 shared Anthony Ashley· 1 shared Dale McGinnityiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMicrobiology

Alexander J. Rurik

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Effects of environmental setting and diet on the gut microbial ecology of eastern hellbenders (Cryptobranchus alleganiensis alleganiensis)

Chloe Cummins, William B. Sutton, Taina McLeod, Jason W. Dallas, Mitra Ghotbi, Lluvia Vargas‐Gastélum, N. Reed Alexander, Alexander J. Rurik, Dale McGinnity, Sherri Doro Reinsch, Pia Sandonato, Jessica Arbour, Michael J. Freake, Anthony Ashley, William M. Ternes, , Donald M. Walker

This study examines how zoo management and diet affect the gut microbiome of eastern hellbenders, finding that wild diets and release into natural habitats can restore microbial communities closer to wild-type patterns.

Animal Microbiome · Apr 16, 2026Peer-reviewedMicrobiology

Absolute abundance unveils Basidiobolus as a cross-domain bridge indirectly bolstering gut microbiome homeostasis

Mitra Ghotbi, Jason W. Dallas, Alexander J. Rurik, Chloe Cummins, Lluvia Vargas‐Gastélum, Marjan Ghotbi, Joseph W. Spatafora, Kian Kelly, N. Reed Alexander, Kylie C. Moe, Kimberly C. Syring, Leila Shadmani, Julissa Perez-Marron, Donald M. Walker

This paper introduces DspikeIn, a tool for absolute abundance quantification in microbiomes, showing it improves resolution and reduces false discoveries compared to relative abundance methods.

The ISME Journal · Jan 1, 2025Peer-reviewedMicrobiology