KG-Bench: Benchmarking Graph Neural Network Algorithms for Drug Repurposing
Siqi Wei, Christo Sasi, Jelle Piepenbrock, Martijn A. Huynen, Peter A.C. ’t Hoen, Tessa Braam, Esther Bührman, Juliette Chevalier, Martina Cornelia Cornel, Lotte Haverman, Vivi Majella Heine, Annelieke R. Müller, Tessel Rigter, Tom Steenbergen, Clara van Karnebeek, , Sara Pintado
KG-Bench benchmarks graph neural networks for drug repurposing using the Open Targets dataset, finding TransformerConv achieves the highest performance.
Bioinformatics · May 7, 2026Peer-reviewedBioinformatics