Author

Colin Horger

University of Delaware

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:protein sequence· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:protein design· 1 Research Focus:protein structure prediction· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Jason P. GleghorniD· 2 shared Logan P HalleeiD· 2 shared David Ke HongiD· 1 shared Luck Haviland· 1 shared Nikolaos RafailidisiD· 1 shared Nikolaos Rafailidis· 1 shared Tamar Peleg· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Jason P. GleghornORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Protify: A Benchmarking Platform Revealing Task Dependence and Homology Leakage in Protein Language Model Evaluation

Nikolaos Rafailidis, Logan P Hallee, Tamar Peleg, Colin Horger, Luck Haviland, Jason P Gleghorn

Protify benchmarks protein language models across tasks and evaluation settings, revealing task dependence and homology leakage in model performance.

bioRxiv · Nov 5, 2026 · PreprintBioinformatics

Annotation Vocabulary (Might Be) All You Need

Logan Hallee, Nikolaos Rafailidis, Colin Horger, David Ke Hong, Jason P. Gleghorn

The paper introduces Annotation Vocabulary to enhance protein embeddings using structured ontologies, demonstrating its effectiveness through various downstream tasks and generative models.

bioRxiv · Jul 30, 2024 · PreprintBioinformatics