A methodological framework for accommodating Cancer Genomics Information in OMOP-CDM using Variation Representation Specification (VRS).
Elisa Benetti, Guido Scicolone, Muhammad Tajwar, Corrado Masciullo, Gabriele Bucci, Michela Riba
The paper proposes a method to integrate cancer genomics data into the OMOP CDM using KOIOS-VRS, a pipeline that converts VCF files into OMOP-compatible formats.
bioRxiv · Feb 10, 2026 · PreprintBioinformatics