Author

Michela Riba

IRCCS Ospedale San RaffaeleORCID 0000-0003-4857-2027Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Elisa BenettiiD· 2 shared Corrado Masciullo· 1 shared Daniel VelascoiD· 1 shared David OlmosiD· 1 shared David TorrentsiD· 1 shared Elena CastroiD· 1 shared Filippo CasoniiD· 1 shared Francesca VincentiiD· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersBioinformatics

Elisa BenettiORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 3, 2026

Anonymized Somatic Tumor Twins (STTs) enable open genome data sharing and use in research and clinical oncology

Nicolás Gaitán, Rodrigo Martín, Daniel Velasco…·David Torrents

The paper introduces GenomeAnonymizer, a method to anonymize tumor-normal DNA sequences, creating STTs that preserve somatic variants and enable open research while protecting privacy.

DOI 10.64898/2026.04.01.715771

humanwhole-genome sequencing

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BioinformaticsbioRxivPreprintFeb 10, 2026

A methodological framework for accommodating Cancer Genomics Information in OMOP-CDM using Variation Representation Specification (VRS).

Elisa Benetti, Guido Scicolone, Muhammad Tajwar…·Michela Riba

The paper proposes a method to integrate cancer genomics data into the OMOP CDM using KOIOS-VRS, a pipeline that converts VCF files into OMOP-compatible formats.

DOI 10.64898/2026.02.09.702490

whole-exome sequencingstatistical model

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Developmental BiologyDevelopmentPeer-reviewedJan 1, 2020

ZFP423 regulates early patterning and multiciliogenesis in the hindbrain choroid plexus

Filippo Casoni, Laura Croci, Francesca Vincenti…·G. Giacomo Consalez

This study shows that ZFP423 is essential for hindbrain choroid plexus development, regulating early patterning and multiciliogenesis through gene expression and cell fate specification.

21 citations

mousebulk RNA-seq

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