Author

D. Marie

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5 Ecology· 4

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 6 Approach:experimental assay· 6 Assay:metagenomics· 6 Approach:statistical model· 3 Assay:proteomics· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

A. Lopes dos Santos· 3 shared D. Vaulot· 3 shared F. Le Gall· 3 shared C. Gerikas Ribeiro· 2 shared F. Partensky· 2 shared L. Garczarek· 2 shared M. Ratin· 2 shared S. Romac· 2 shared

Activity by Year

2019-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersEcology

A. Lopes dos Santos

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

Phago-mixotrophy of small eukaryotic phytoplankton might alleviate iron limitation in HNLC Southern Ocean

D. R. Y. Ong, A. Gutierrez-Rodriguez, K. A. Safi, D. Marie, K. E. Selph, M. R. Stukel, M. Decima, A. Lopes dos Santos

The paper measures carbon fixation rates and taxonomic composition of small phytoplankton in different oceanic regions, suggesting phago-mixotrophy may help alleviate iron limitation in certain populations.

bioRxiv · Jan 8, 2024Microbiology

Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems

f. lombard, G. Bourdin, S. Pesant, S. Agostini, A. Baudena, E. Boissin, N. Cassar, M. Clampitt, P. Conan, O. da Silva, C. Dimier, E. Douville, A. Elineau, J. Fin, J. M. Flores, , S Reynaud

The paper describes the Tara Pacific expedition's sampling methodology and provides access to datasets from coral reef and surface ocean ecosystems.

bioRxiv · May 25, 2022 · PreprintEcology

Arctic phytoplankton spring bloom diversity across the marginal ice zone in Baffin Bay

C. G. Ribeiro, A. L. dos Santos, N. Trefault, D. Marie, C. Lovejoy, D. Vaulot

The paper examines phytoplankton community structure across the marginal ice zone in Baffin Bay using 18S rRNA sequencing and environmental data, identifying distinct community features in under-ice, marginal ice zone, and open water sectors.

bioRxiv · Mar 14, 2022 · PreprintMicrobiology

Comparative thermophysiology of marine Synechococcus CRD1 strains isolated from different thermal niches in iron-depleted areas

M. Ferrieux, L. Dufour, H. Dore, M. Ratin, A. Gueneugues, L. Chasselin, D. Marie, F. Rigaut-Jalabert, F. Le Gall, T. Sciandra, G. Monier, M. Hoebeke, E. Corre, X. Xia, H. Liu, , L. Garczarek

The paper compares thermophysiological traits of three CRD1 Synechococcus strains from different thermal niches, showing distinct thermotypes despite lacking typical cold thermotype features.

bioRxiv · Mar 9, 2022Microbiology

Exploring the phycosphere of Emiliania huxleyi: from bloom dynamics to microbiome assembly experiments

M. Camara dos Reis, S. Romac, F. Le Gall, D. Marie, M. J. Frada, G. Koplovitz, T. Cariou, N. Henry, C. de Vargas, C. Jeanthon

This study investigates the microbiome dynamics of Emiliania huxleyi blooms by analyzing bacterial communities from bloom and non-bloom conditions and their interactions over time.

bioRxiv · Feb 21, 2022Ecology

Diversity and evolution of pigment types and the phycobilisome rod gene region of marine Synechococcus cyanobacteria

T. Grebert, L. Garczarek, V. Daubin, F. Humily, D. Marie, M. Ratin, A. Devailly, G. K. Farrant, I. Mary, D. Mella-Flores, G. Tanguy, K. Labadie, P. Wincker, D. M. Kehoe, F. Partensky

The paper examines the genomic variability and evolutionary dynamics of the phycobilisome rod gene region in Synechococcus cyanobacteria across different pigment types.

bioRxiv · Jun 21, 2021 · PreprintMicrobiology

Dinophyceae use exudates as weapons against the parasite Amoebophrya sp. (Syndiniales)

M. Long, D. Marie, J. Szymczak, J. Toullec, E. Bigeard, M. Sourisseau, M. Le Gac, L. Guillou, C. Jauzein

The paper shows that exudates from resistant Dinophyceae species inhibit the parasite Amoebophrya sp., reducing its survival and progeny without physical contact.

bioRxiv · Jan 5, 2021Microbiology

Annual phytoplankton dynamics in coastal waters from Fildes Bay, Western Antarctic Peninsula.

N. Trefaut, R. De la Iglesia, M. Moreno-Pino, A. Lopes dos Santos, C. Gerikas Ribeiro, A. Cristi, D. Marie, D. Vaulot

The paper analyzes phytoplankton dynamics in Fildes Bay, Western Antarctic Peninsula, using metabarcoding to reveal seasonal and size-fractionated community patterns and a potential new Micromonas clade.

bioRxiv · Oct 27, 2020Ecology

Culturable diversity of Arctic phytoplankton during pack ice melting

C. Gerikas Ribeiro, A. Lopes dos Santos, P. Gourvil, F. Le Gall, D. Marie, M. Tragin, I. Probert, D. Vaulot

The paper isolates and characterizes Arctic phytoplankton strains using multiple culturing methods, identifying 276 strains across five divisions and highlighting potential new species.

bioRxiv · May 20, 2019Ecology