Author

D. O. Deppong

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

C. D. Aimone· 3 shared J. S. Hoyer· 3 shared L. Hanley-Bowdoin· 3 shared S. Duffy· 3 shared I. Carbone· 2 shared A. E. Dye· 1 shared A. Jacobson· 1 shared E. Lavington· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersPlant Biology

C. D. Aimone

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3 papers

Recent·Most cited

Population diversity of cassava mosaic begomoviruses increases over the course of serial vegetative propagation

C. D. Aimone, E. Lavington, J. S. Hoyer, D. O. Deppong, L. Mickelson-Young, A. Jacobson, G. G. Kennedy, I. Carbone, L. Hanley-Bowdoin, S. Duffy

This study shows that vegetative propagation increases viral diversity in cassava mosaic begomoviruses over time, while temperature and satellite DNA have minimal impact.

bioRxiv · Mar 22, 2021Plant Biology

An improved experimental pipeline for preparing circular ssDNA viruses for next-generation sequencing

C. D. Aimone, J. S. Hoyer, A. E. Dye, D. O. Deppong, S. Duffy, I. Carbone, L. Hanley-Bowdoin

The paper presents an optimized protocol for sequencing single-stranded DNA viruses using rolling circle amplification and size selection, achieving at least 50% read mapping to the viral reference genome.

bioRxiv · Sep 30, 2020 · PreprintPlant Biology

Deeply sequenced infectious clones of key cassava begomovirus isolates from Cameroon

J. S. Hoyer, V. N. Fondong, M. M. Dallas, C. D. Aimone, D. O. Deppong, S. Duffy, L. Hanley-Bowdoin

The paper deeply sequences and makes publicly available infectious clones of two cassava begomoviruses from Cameroon.

bioRxiv · Aug 10, 2020Microbiology