Author

Daniel Nachreiner

University of Wisconsin–Madison

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1

Frequent Co-Authors

Adam ShedivyiD· 1 shared Aden O'Brien· 1 shared Akniyet NurboliD· 1 shared Altaf BarelviiD· 1 shared Anna RitziD· 1 shared Anthony GitteriD· 1 shared Canek Llera-Magord· 1 shared Chris S. MagnanoiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Adam ShedivyORCID

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1 paper

Recent·Most cited

A Framework for Benchmarking Pathway Reconstruction Algorithms

Neha Talluri, Tristan Figueroa-Reid, Justin Hiemstra, Chris S. Magnano, Adam Shedivy, Nistha Panda, Yancheng Liu, Sumedha Sanjeev, Oliver Faulkner Anderson, Altaf Barelvi, Aden O'Brien, Olivia T Johnson, James A. Haddad, Spencer Halberg, Akniyet Nurbol, , Anthony Gitter

This paper benchmarks 14 pathway reconstruction algorithms across 822 datasets using a standardized framework to evaluate performance, similarity, and computational efficiency.

bioRxiv · Aug 9, 2026 · PreprintBioinformatics