Author

Diego Miranda-Saavedra

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Andrew Paul Hutchins· 1 shared Hidetoshi Kono· 1 shared Kenji Mizuguchi· 1 shared Munazah Andrabi· 1 shared Ruth Nussinov· 1 shared Shandar Ahmad· 1 shared

Activity by Year

2015-2015 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperGenomics

Andrew Paul Hutchins

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1 paper

Recent·Most cited

Genome-wide transcription factor activities are explained by intrinsic conformational dynamics of binding-sites and distal flanking-regions

Munazah Andrabi, Andrew Paul Hutchins, Diego Miranda-Saavedra, Hidetoshi Kono, Ruth Nussinov, Kenji Mizuguchi, Shandar Ahmad

This study introduces DynaSeq, a method that uses DNA conformational dynamics to predict TF binding patterns and explains how these dynamics influence TF specificity in STAT3 and chromatin structural classes.

bioRxiv · Jun 9, 2015 · PreprintGenomics