Author

E. G. Danchin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Organism:fungi (other)· 1

Frequent Co-Authors

D. K. Kozlowski· 2 shared M. Bailly-Bechet· 2 shared A. C. Machado· 1 shared A. Derzelle· 1 shared A. Houtain· 1 shared A. Limasset· 1 shared A. Loisier· 1 shared A. Seassau· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersEvolutionary Biology

D. K. Kozlowski

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Author profile →

4 papers

Recent·Most cited

Genome sequence and annotation of Periconia digitata, a promising biocontrol agent of phytopathogenic oomycetes

E. Bovio, C. Rancurel, A. Seassau, M. Magliano, M. Gislard, A. Loisier, C. Kuchly, M. Ponchet, E. G. Danchin, C. Van Ghelder

This paper presents the genome sequence and annotation of Periconia digitata, a biocontrol agent, using long-read sequencing and supports it with transcriptomic and proteomic data.

bioRxiv · Mar 17, 2023 · PreprintMicrobiology

Homologous chromosomes in asexual rotifer Adineta vaga suggest automixis

P. Simion, J. Narayan, A. Houtain, A. Derzelle, L. Baudry, E. Nicolas, M. Cariou, N. Guiglielmoni, D. Kozlowski, F. R. Gaudray, M. Terwagne, J. Virgo, B. Noel, P. Wincker, E. G. Danchin, , K. Van Doninck

This study presents a high-quality chromosome-scale genome assembly of the asexual bdelloid rotifer Adineta vaga, revealing homologous chromosomes and evidence of recombination consistent with automixis.

bioRxiv · Jun 16, 2020Evolutionary Biology

Transposable Elements are an evolutionary force shaping genomic plasticity in the parthenogenetic root-knot nematode Meloidogyne incognita

D. K. Kozlowski, R. Hassanaly-Goulamhoussen, M. Da Rocha, G. D. Koutsovoulos, M. Bailly-Bechet, E. G. Danchin

This study identifies transposable elements (TEs) as drivers of genomic plasticity in the parthenogenetic nematode Meloidogyne incognita, showing their activity and impact on gene regions across isolates.

bioRxiv · Apr 30, 2020Evolutionary Biology

Population genomics supports clonal reproduction and multiple gains and losses of parasitic abilities in the most devastating nematode plant pest

G. Koutsovoulos, E. Marques, M.-J. Arguel, L. Duret, A. C. Machado, R. M. Carneiro, D. K. Kozlowski, M. Bailly-Bechet, P. Castagnone-Sereno, E. V. Albuquerque, E. G. Danchin

This study confirms clonal reproduction in Meloidogyne incognita using population genomics and shows no significant association between genetic variation and host race or geography.

bioRxiv · Jul 9, 2019Evolutionary Biology