Author

E. M. Zdobnov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5 Zoology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 5 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:ecology & biodiversity· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:proteomics· 2 Approach:benchmark study· 1

Frequent Co-Authors

C. Hassler· 2 shared C. M. Rands· 2 shared F. Danza· 2 shared J. S. Saini· 2 shared M. B. Duhaime· 2 shared M. Fourquez· 2 shared M. Manni· 2 shared M. Tonolla· 2 shared

Activity by Year

2017-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersMicrobiology

C. Hassler

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Author profile →

6 papers

Recent·Most cited

Tsetse RNA Virome: Novel Iflavirus Genomes in Glossina morsitans and Other Tsetse Species

M. Manni, E. M. Zdobnov

The paper identifies four iflaviruses in tsetse flies, with one prevalent in G. morsitans and present in all its RNA-seq libraries, suggesting maternal transmission and potential impact on host biology.

bioRxiv · Oct 23, 2021 · PreprintZoology

Bacterial, phytoplankton, and viral dynamics of meromictic Lake Cadagno offer insights into the Proterozoic ocean microbial loop

J. S. Saini, C. Hassler, R. N. Cable, M. Fourquez, F. Danza, S. Roman, M. Tonolla, N. Storelli, S. Jacquet, E. M. Zdobnov, M. B. Duhaime

This study analyzes microbial dynamics in Lake Cadagno to understand Proterozoic ocean food webs, finding key roles for viruses and microbial guilds in organic matter cycling.

bioRxiv · Oct 13, 2021 · PreprintMicrobiology

Microbial loop of a Proterozoic ocean analogue

J. S. Saini, C. Hassler, R. Cable, M. Fourquez, F. Danza, S. Roman, M. Tonolla, N. Storelli, S. Jacquet, E. M. Zdobnov, M. B. Duhaime

This study investigates the microbial loop in Lake Cadagno, revealing the distribution of microbial communities and their roles in nutrient cycling and organic matter recycling in a stratified, anoxic environment.

bioRxiv · Aug 17, 2021 · PreprintMicrobiology

LEMMI: A continuous benchmarking platform for metagenomics classifiers

M. Seppey, M. Manni, E. M. Zdobnov

LEMMI provides a continuous benchmarking platform for metagenomics classifiers, enabling tool comparison and standardized usage.

bioRxiv · Oct 24, 2019Microbiology

Comparative genomics groups phages of Negativicutes and classical Firmicutes despite different Gram-staining properties

C. M. Rands, H. Brussow, E. M. Zdobnov

The paper identifies and characterizes prophages in Negativicute bacteria, finding they are more closely related to Firmicute prophages than Proteobacterial ones, suggesting vertical co-evolution rather than horizontal transfer from Gram-negative hosts.

bioRxiv · Apr 11, 2019Microbiology

ACI-1 class A beta-lactamase is widespread across human gut microbiomes due to transposons harboured by tailed prophages

C. M. Rands, E. V. Starikova, H. Brüssow, E. V. Kriventseva, V. M. Govorun, E. M. Zdobnov

This study identifies ACI-1 class A beta-lactamase in human gut microbiomes, showing its global distribution and mobility via transposons in prophage contexts.

bioRxiv · Dec 18, 2017Microbiology