Author

E. van Dijk

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Approach:deep learning· 1

Frequent Co-Authors

Y. Jaszczyszyn· 2 shared A. Boutserin· 1 shared A. Fleiss· 1 shared A. Lavrova· 1 shared B. Westerman· 1 shared B. Ylstra· 1 shared C. Deneve-Larrazet· 1 shared C. Janoir· 1 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersMicrobiology

Y. Jaszczyszyn

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Dual RNA-seq study of the dynamics of coding and non-coding RNAs expression during Clostridioides difficile infection in a mouse model

V. Kreis, C. Toffano-Nioche, C. Deneve-Larrazet, J.-C. Marvaud, J. R. Garneau, F. Dumont, E. van Dijk, Y. Jaszczyszyn, A. Boutserin, F. D'Angelo, D. Gautheret, I. Kansau, C. Janoir, O. Soutourina

This paper uses dual RNA-seq to study coding and non-coding RNA expression dynamics in C. difficile infection in mice, identifying new ncRNA genes and host miRNAs associated with infection.

bioRxiv · Jun 28, 2024 · PreprintMicrobiology

Evolutionary trajectories of IDH-mutant astrocytoma identify molecular grading markers related to cell cycling

W. R. Vallentgoed, Y. Hoogstrate, K. A. van Garderen, L. van Hijfte, E. van Dijk, M. C. Kouwenhoven, J. M. Niers, K. Draaisma, I. Martin, W. W. de Leng, C. M. S. Tesileanu, I. de Heer, M. Diepeveen, A. Lavrova, P. P. Eijk, , P. J. French

The paper analyzes multi-omics data from IDH-mutant astrocytomas to identify molecular markers of malignant progression linked to cell cycling and DNA methylation changes.

bioRxiv · Mar 5, 2024Cancer Biology

The evolution of the temporal program of genome replication

N. Agier, S. Delmas, Q. Zhang, A. Fleiss, Y. Jaszczyszyn, E. van Dijk, C. Thermes, M. Weigt, M. Cosentino-Lagomarsino, G. Fischer

The paper analyzes replication timing programs across ten Lachancea yeast species, finding linear evolution with divergence and high turnover of active replication origins.

bioRxiv · Oct 27, 2017Evolutionary Biology