Author

E.N. Ilina

Federal Service for Surveillance on Consumer Rights Protection and Human Wellbeing

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:large language model· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander I. ManoloviD· 1 shared Alexander N. LukasheviD· 1 shared Maria MolchanovaiD· 1 shared Nikolay PopoviD· 1 shared S.A. Gurov· 1 shared Vera PanovaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Alexander I. ManolovORCID

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1 paper

Recent·Most cited

Evaluating Reference-Independent Pipelines for the Detection of Spreading Organisms in Metagenomic Datasets

Nikolay Popov, Vera Panova, Maria Molchanova, S.A. Gurov, Alexander N. Lukashev, E.N. Ilina, Alexander I. Manolov

This study evaluates four reference-independent pipelines for detecting spreading organisms in metagenomic datasets, finding the coverage-based method most reliable for sensitive pathogen discovery.

bioRxiv · May 6, 2026 · PreprintBioinformatics