Transformer-based Deep Learning for Glycan Structure Inference from Tandem Mass Spectrometry
Ejas Althaf Abtheen, Arun Kumar Singh, Shyam Sriram, Changyou Chen, Sriram Neelamegham, Rudiyanto Gunawan
This paper introduces GlycoBERT and GlycoBART, transformer-based models for glycan structure prediction from MS/MS data, achieving high accuracy and enabling de novo structure inference.
bioRxiv · Jul 2, 2025 · PreprintBioinformatics