Author

Eleanor Cummins

Monash University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1 Approach:transformer / foundation model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anton Yariv PelegiD· 1 shared Naima VahabiD· 1 shared Navya TyagiiD· 1 shared Sonika TyagiiD· 1 shared Tyrone CheniD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Anton Yariv PelegORCID

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1 paper

Recent·Most cited

genomicBERT: A Light-weight Foundation Model for Genome Analysis using Unigram Tokenization and Specialized DNA Vocabulary

Tyrone Chen, Naima Vahab, Navya Tyagi, Eleanor Cummins, Anton Yariv Peleg, Sonika Tyagi

This paper introduces genomicBERT, a lightweight genome analysis model that improves efficiency and performance through specialized DNA vocabulary and tokenization, validated across diverse case studies.

bioRxiv · May 31, 2023 · PreprintBioinformatics