Benchmarking solutions to the T-cell receptor epitope prediction problem: IMMREP22 workshop report
Pieter Meysman, Justin Barton, Barbara Bravi, Liel Cohen-Lavi, Vadim K Karnaukhov, Elias Lilleskov, Alessandro Montemurro, Morten Nielsen, Thierry Mora, Paul Pereira, Anna Postovskaya, María Rodríguez Martínez, Jorge Fernández-de-Cossio-Díaz, Alexandra Vujkovic, Aleksandra M. Walczak, , Virag Sharma
The paper benchmarks 23 TCR-epitope prediction models, finding that using paired-chain alpha-beta and CDR1/2/V/J data improves performance, and simple distance-based methods can be competitive.
ImmunoInformatics · Feb 3, 2023Peer-reviewedBioinformatics