Author

F. H. Coutinho

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:virus· 1

Frequent Co-Authors

C. B. Silveira· 2 shared A. P. Camargo· 1 shared A. Tritt· 1 shared B. E. Dutilh· 1 shared B. G. N. Andrade· 1 shared C. M. Duarte· 1 shared C. Molina-Pardines· 1 shared D. Vaque· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersMicrobiology

C. B. Silveira

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities

F. H. Coutinho, C. B. Silveira, M. Sebastian, P. Sanchez, C. M. Duarte, D. Vaque, J. M. Gasol, S. G. Acinas

The paper analyzes deep ocean viral communities to show that water mass age influences their taxonomic composition and auxiliary metabolic gene content.

bioRxiv · Oct 13, 2022Microbiology

iPHoP: an integrated machine-learning framework to maximize host prediction for metagenome-assembled virus genomes

S. Roux, A. P. Camargo, F. H. Coutinho, S. M. Dabdoub, B. E. Dutilh, S. Nayfach, A. Tritt

iPHoP integrates multiple methods to predict viral hosts from metagenome-derived genomes with low false discovery rate.

bioRxiv · Jul 28, 2022Microbiology

Nasopharyngeal microbial communities of patients infected with SARS-COV-2 that developed COVID-19.

M. P. Ventero, R. R. C. Cuadrat, I. Vidal, B. G. N. Andrade, C. Molina-Pardines, J. M. Haro-Moreno, F. H. Coutinho, E. Merino, L. C. Regitano, C. B. Silveira, H. Afli, M. Lopez-Perez, J. C. Rodriguez

This study examines the nasopharyngeal microbiome of SARS-CoV-2 infected patients with varying COVID-19 severity, finding differences in OTU composition and co-abundance network complexity.

bioRxiv · Dec 1, 2020Microbiology