Controllable All-Atom Protein Generation with Latent Diffusion
Amy X. Lu, Jason Yang, Yueming Long, Theophile Lambert, Wilson Yan, Sarah A. Robinson, Kevin Yang, Vladimir Gligorijević, Kyunghyun Cho, Richard Bonneau, Nathan C. Frey, Frances Arnold, Pieter Abbeel
PLAID generates controllable all-atom protein structures from sequences using a diffusion model trained on sequence data, enabling functional control through Gene Ontology and organism keywords.
bioRxiv · Dec 2, 2024 · PreprintBioinformatics