Author

Wilson Yan

Genentech

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Approach:diffusion model· 1 Research Focus:dimensionality reduction· 1 Approach:machine learning (classical)· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Approach:statistical model· 1

Frequent Co-Authors

Amy X. LuiD· 2 shared Kyunghyun ChoiD· 2 shared Nathan C. FreyiD· 2 shared Pieter AbbeeliD· 2 shared Richard BonneauiD· 2 shared Vladimir GligorijevićiD· 2 shared Frances Arnold· 1 shared Jason YangiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersBioinformatics

Amy X. LuORCID

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Author profile →

2 papers

Recent·Most cited

Tokenized and Continuous Embedding Compressions of Protein Sequence and Structure

Amy X. Lu, Wilson Yan, Kevin K. Yang, Vladimir Gligorijević, Kyunghyun Cho, Pieter Abbeel, Richard Bonneau, Nathan C. Frey

The paper compresses protein sequence and structure representations, showing that compressed embeddings retain structural accuracy and enable downstream applications.

Patterns · Jun 1, 2025Peer-reviewedBioinformatics

Controllable All-Atom Protein Generation with Latent Diffusion

Amy X. Lu, Jason Yang, Yueming Long, Theophile Lambert, Wilson Yan, Sarah A. Robinson, Kevin Yang, Vladimir Gligorijević, Kyunghyun Cho, Richard Bonneau, Nathan C. Frey, Frances Arnold, Pieter Abbeel

PLAID generates controllable all-atom protein structures from sequences using a diffusion model trained on sequence data, enabling functional control through Gene Ontology and organism keywords.

bioRxiv · Dec 2, 2024 · PreprintBioinformatics