Author

Francisco Cerqueira

AIT Austrian Institute of Technology GmbH

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexandre Bartholomaus· 1 shared Antonis ChatzinotasiD· 1 shared Belén GuijarroiD· 1 shared Costas C. PapagiannitsisiD· 1 shared Dimitrios Georgios KarpouzasiD· 1 shared Gunter Brader· 1 shared J. SaraivaiD· 1 shared Luc CornetiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alexandre Bartholomaus

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1 paper

Recent·Most cited

A new automated pipeline for whole genome shotgun sequencing analysis and hazard characterization of microbial pesticides

J. Saraiva, Valérian Lupo, Francisco Cerqueira, Stavroula Makri, Sotirios Vasileiadis, Belén Guijarro, Alexandre Bartholomaus, Costas C. Papagiannitsis, Marie Harmel, Staphan Declerck, Luc Cornet, Antonis Chatzinotas, Dimitrios Georgios Karpouzas, Gunter Brader

The paper introduces an automated pipeline for whole-genome sequencing analysis of microbial pesticides to improve hazard characterization and risk assessment.

bioRxiv · Jul 24, 2026 · PreprintBioinformatics