Author

Sotirios Vasileiadis

University of ThessalyORCID 0000-0002-2048-8192Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Assay:metabolomics· 1 Assay:metagenomics· 1

Frequent Co-Authors

Dimitrios Georgios KarpouzasiD· 3 shared Antonis ChatzinotasiD· 2 shared Chiara PerruchoniD· 2 shared Alexandre Bartholomaus· 1 shared Ana AgüeraiD· 1 shared Belén GuijarroiD· 1 shared Costas C. PapagiannitsisiD· 1 shared Eleni Katsivelou· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersBioinformatics

Dimitrios Georgios KarpouzasORCID

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3 papers

Recent·Most cited

A new automated pipeline for whole genome shotgun sequencing analysis and hazard characterization of microbial pesticides

J. Saraiva, Valérian Lupo, Francisco Cerqueira, Stavroula Makri, Sotirios Vasileiadis, Belén Guijarro, Alexandre Bartholomaus, Costas C. Papagiannitsis, Marie Harmel, Staphan Declerck, Luc Cornet, Antonis Chatzinotas, Dimitrios Georgios Karpouzas, Gunter Brader

The paper introduces an automated pipeline for whole-genome sequencing analysis of microbial pesticides to improve hazard characterization and risk assessment.

bioRxiv · Jul 24, 2026 · PreprintBioinformatics

Isolation of a novel Sphingomonas strain able to degrade the pleuromutilin tiamulin: omic analysis reveals its transformation pathway

Chiara Perruchon, Niki Tagkalidou, Natasa P. Kalogiouri, Eleni Katsivelou, Panagiotis A. Karas, Urania Menkissoglu‐Spiroudi, Sotirios Vasileiadis, Dimitrios Georgios Karpouzas

The paper isolates a novel Sphingomonas strain capable of degrading tiamulin and uses omics analysis to propose a transformation pathway for the antibiotic.

bioRxiv · Dec 16, 2024 · PreprintGenomics

Nutritional inter-dependencies and a carbazole-dioxygenase are key elements of a bacterial consortium relying on a Sphingomonas for the degradation of the fungicide thiabendazol

Sotirios Vasileiadis, Chiara Perruchon, Scheer Benjamin, Lorenz Adrian, Steinbach Nicole, Marco Trevisan, Patricia Plaza‐Bolaños, Ana Agüera, Antonis Chatzinotas, Dimitrios Georgios Karpouzas

The paper identifies a bacterial consortium degrading thiabendazole, with Sphingomonas playing a central role through a carbazole dioxygenase, and reveals interdependencies between consortium members.

bioRxiv · Mar 30, 2020 · PreprintSystems Biology