Author

Gianfranco Botta

University of Zurich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander PopescuiD· 1 shared Ashley ByrneiD· 1 shared Christopher D. NelsoniD· 1 shared David WisseliD· 1 shared Julieta Ramírez Cuéllar· 1 shared Kalina Radoynovska· 1 shared Kim SchneideriD· 1 shared Mark D. RobinsoniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alexander PopescuORCID

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1 paper

Recent·Most cited

Benchmarking long-read RNA-seq across modalities, methods, and sequencing depth in iNeurons

Gianfranco Botta, David Wissel, Samuel Higgins, Tomasz Chełmicki, Alexander Popescu, Kalina Radoynovska, Seraphin Probst, Julieta Ramírez Cuéllar, Kim Schneider, Zeynab Nayernia, Ashley Byrne, Christopher D. Nelson, Zora D. Modrusan, Stormy J. Chamberlain, William Stephenson, , Rajib Schubert

This study benchmarks long-read RNA-seq across bulk and single-cell platforms, technologies, and sequencing depths, identifying optimal methods for transcript discovery and quantification.

bioRxiv · Apr 4, 2026 · PreprintBioinformatics