Differential analysis of RNA-Seq incorporating quantification uncertainty
Harold J Pimentel, Nicolas Bray, Suzette Puente, Páll Melsted, Lior Pachter
The paper introduces a method for differential RNA-Seq analysis that separates biological and inferential variance using bootstrapping and response error modeling, implemented in the sleuth app.
bioRxiv · Jun 10, 2016Bioinformatics