Author

Hiroki Takamiyagi

Okinawa Institute of Science and Technology Graduate University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Emma GairiniD· 2 shared Marcela HerreraiD· 2 shared Saori MiuraiD· 2 shared Vincent LaudetiD· 2 shared Camille A. SautereauiD· 1 shared Jann ZwahleniD· 1 shared Yann GibertiD· 1 shared Zoé ChamotiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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2 shared papersBioinformatics

Emma GairinORCID

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2 papers

Recent·Most cited

Decoding the constraints acting on a coastal fish using landscape transcriptomics

Emma Gairin, Saori Miura, Zoé Chamot, Camille A. Sautereau, Jann Zwahlen, Hiroki Takamiyagi, Yann Gibert, Marcela Herrera, Vincent Laudet

The paper uses landscape transcriptomics to show urbanization in coastal habitats leads to inflammation and immune gene expression changes in fish, resembling overfed lab conditions.

bioRxiv · Aug 5, 2025 · PreprintBioinformatics

The genome of the sapphire damselfish Chrysiptera cyanea: a new resource to support further investigation of the evolution of Pomacentrids

Emma Gairin, Saori Miura, Hiroki Takamiyagi, Marcela Herrera, Vincent Laudet

The paper presents the first genome assembly of a Pomacentrid fish, Chrysiptera cyanea, using long-read sequencing, providing a resource for studying evolutionary adaptations and environmental monitoring.

Gigabyte · Dec 31, 2024Peer-reviewedGenomics