DeepTrio: Variant Calling in Families Using Deep Learning
Lucas Brambrink, Alexey Kolesnikov, Sidharth Goel, Maria Nattestad, Taedong Yun, Gunjan Baid, Howard Yang, Cory Y. McLean, Kishwar Shafin, Pi-Chuan Chang, Andrew W. Carroll
DeepTrio improves variant calling in family trios using deep learning, achieving higher accuracy than DeepVariant, especially at lower coverages.
bioRxiv · Apr 5, 2021 · PreprintBioinformatics