Author

Hugo Varet

Primary ORCID profile (0000-0003-3980-4463 · 12 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Hugo VaretiD12 papers · Institut Pasteur

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:machine learning (classical)· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexandre Alcais· 1 shared Fabienne JABOT-HANINiD· 1 shared Frederic Tores· 1 shared Jean-Philippe Jais· 1 shared Jean-Yves Coppée· 1 shared Marie-Agnès Dillies· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 7 mutual co-author links

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1 shared paperGenomics

Alexandre Alcais

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2 papers

Recent·Most cited

RFPRED: A RANDOM FOREST APPROACH FOR PREDICTION OF MISSENSE VARIANTS IN HUMAN EXOME

Fabienne JABOT-HANIN, Hugo Varet, Frederic Tores, Alexandre Alcais, Jean-Philippe Jais

RfPred uses random forest to create a meta-score for predicting deleterious missense variants in human exomes, outperforming existing methods and providing pre-calculated scores for all non-synonymous SNPs.

bioRxiv · Jan 20, 2016 · PreprintGenomics

SARTools: a DESeq2- and edgeR-based R pipeline for comprehensive differential analysis of RNA-Seq data

Hugo Varet, Jean-Yves Coppée, Marie-Agnès Dillies

SARTools provides an R pipeline for differential RNA-Seq analysis using DESeq2 and edgeR, with quality control and reproducibility features.

bioRxiv · Sep 26, 2015Bioinformatics