Author

J. D. Fudyma

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Research Focus:cell type annotation· 2 Research Focus:ecology & biodiversity· 2 Approach:experimental assay· 2 Organism:plant (other)· 2 Approach:statistical model· 2

Frequent Co-Authors

A. M. ter Horst· 4 shared J. B. Emerson· 4 shared C. Santos-Medellin· 2 shared A. Bak· 1 shared D. A. Hernandez· 1 shared D. M. Rizzo· 1 shared G. Gogul· 1 shared J. L. Sones· 1 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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4 shared papersEcology

A. M. ter Horst

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4 papers

Recent·Most cited

Exploring viral particle, soil, and extraction buffer physicochemical characteristics and their impacts on extractable viral communities

J. D. Fudyma, A. M. ter Horst, C. Santos-Medellin, J. Sorensen, G. Gogul, L. Hillary, S. Geonczy, J. Pett-Ridge, J. B. Emerson

This study examines how extraction buffer chemistry affects extractable viral communities in different soil types, finding that spatial distance is the primary driver of community composition.

bioRxiv · Nov 13, 2023Microbiology

Almond rhizosphere viral, prokaryotic, and fungal communities differed significantly among four California orchards and in comparison to bulk soil communities

A. M. ter Horst, T. V. Adebiyi, D. A. Hernandez, J. D. Fudyma, J. B. Emerson

The paper compares viral, prokaryotic, and fungal communities in almond rhizospheres and bulk soils across four California orchards, finding significant differences between orchards but not between soil types.

bioRxiv · Jun 3, 2023 · PreprintEcology

Dispersal, habitat filtering, and eco-evolutionary dynamics as drivers of local and global wetland viral biogeography

A. M. ter Horst, J. D. Fudyma, J. L. Sones, J. B. Emerson

The paper analyzes viral biogeography in wetlands, finding that dispersal, habitat filtering, and eco-evolutionary dynamics shape viral communities across space and time.

bioRxiv · Apr 28, 2023Ecology

RNA viral communities are structured by host plant phylogeny in oak and conifer leaves

A. M. ter Horst, J. D. Fudyma, A. Bak, M. S. Hwang, C. Santos-Medellin, K. A. Stevens, D. M. Rizzo, M. Al Rwahnih, J. B. Emerson

The paper analyzes viral communities in oak and conifer leaves, finding that host plant phylogeny structures these communities and reveals host-specific viromes.

bioRxiv · Dec 17, 2021Ecology