Author

J. De La Cruz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:protein structure prediction· 2 Research Focus:protein design· 1 Assay:protein sequence· 1 Assay:protein structure· 1

Frequent Co-Authors

A. K. Bera· 2 shared A. Kang· 2 shared B. I. M. Wicky· 1 shared B. Sankaran· 1 shared D. Baker· 1 shared F. DiMaio· 1 shared G. Bhardwaj· 1 shared G. Jimenez Oses· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBiochemistry

A. K. Bera

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2 papers

Recent·Most cited

BiochemistrybioRxivOct 3, 2023

Improving protein expression, stability, and function with ProteinMPNN

K. H. Sumida, R. Nunez Franco, I. Kalvet…·D. Baker

This paper introduces ProteinMPNN, a deep learning model that improves protein expression, stability, and function by incorporating evolutionary and structural information.

DOI 10.1021/jacs.3c10941

protein sequencedeep learning

𝕏 PostBluesky

BiochemistrybioRxivPreprintFeb 25, 2023

Cyclic peptide structure prediction and design using AlphaFold

S. A. Rettie, K. V. Campbell, A. K. Bera…·G. Bhardwaj

This paper modifies AlphaFold to predict and design cyclic peptides, achieving high accuracy in structure prediction and de novo design with experimental validation.

DOI 10.1101/2023.02.25.529956

protein structuredeep learning

𝕏 PostBluesky