Author

Jakob Kailer

University of Freiburg

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Camila L. FullioiD· 1 shared Harald BinderiD· 1 shared Kiana FarhadyariD· 1 shared Laia Canal GuitartiD· 1 shared Maren HackenbergiD· 1 shared Niklas BrunniD· 1 shared Tanja VogeliD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Camila L. FullioORCID

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1 paper

Recent·Most cited

Mapping spatial cell-cell communication programs by tailoring chains of cells for transformer neural networks

Niklas Brunn, Laia Canal Guitart, Kiana Farhadyar, Camila L. Fullio, Jakob Kailer, Tanja Vogel, Maren Hackenberg, Harald Binder

The paper introduces scCChain, a transformer-based framework for mapping spatial cell-cell communication programs in spatial transcriptomics data, identifying hotspots at single-cell and spot resolution.

bioRxiv · Mar 20, 2026 · PreprintBioinformatics