Author

Kiana Farhadyar

University of FreiburgORCID 0000-0002-0518-8597Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Research Focus:protein design· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Amin Boroomand· 1 shared Camila L. FullioiD· 1 shared Ghasem Hosseini SalekdehiD· 1 shared Harald BinderiD· 1 shared Jakob Kailer· 1 shared Kaveh KavousiiD· 1 shared Laia Canal GuitartiD· 1 shared Maren HackenbergiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Amin Boroomand

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMar 20, 2026

Mapping spatial cell-cell communication programs by tailoring chains of cells for transformer neural networks

Niklas Brunn, Laia Canal Guitart, Kiana Farhadyar…·Harald Binder

The paper introduces scCChain, a transformer-based framework for mapping spatial cell-cell communication programs in spatial transcriptomics data, identifying hotspots at single-cell and spot resolution.

1 citation

humanspatial transcriptomics

𝕏 PostBluesky

BioinformaticsBiotechnology and BioengineeringPeer-reviewedOct 23, 2020

A generalized machine-learning aided method for targeted identification of industrial enzymes from metagenome: a xylanase temperature dependence case study

Mehdi Foroozandeh Shahraki, Kiana Farhadyar, Kaveh Kavousi…·Ghasem Hosseini Salekdeh

This paper develops a machine learning method to predict the thermal dependence of xylanases from metagenomic data, identifying three novel xylanases from rumen microbiota.

51 citations

metagenomicsmachine learning (classical)

𝕏 PostBluesky