Author

James Thomson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Christina Kendziorski· 2 shared Li-Fang Chu· 2 shared Ron Stewart· 2 shared Jeea Choi· 1 shared Keegan D. KorthaueriD· 1 shared Michael A. NewtoniD· 1 shared Ning Leng· 1 shared Yuan Li· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Christina Kendziorski

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

scDD: A statistical approach for identifying differential distributions in single-cell RNA-seq experiments

Keegan D. Korthauer, Li-Fang Chu, Michael A. Newton, Yuan Li, James Thomson, Ron Stewart, Christina Kendziorski

scDD identifies differential expression patterns in single-cell RNA-seq by modeling complex distribution differences, outperforming existing methods in detecting subtle gene expression changes.

bioRxiv · May 13, 2016Genomics

OEFinder: A user interface to identify and visualize ordering effects in single-cell RNA-seq data

Ning Leng, Jeea Choi, Li-Fang Chu, James Thomson, Christina Kendziorski, Ron Stewart

OEFinder identifies and visualizes ordering effects in Fluidigm C1 single-cell RNA-seq data to detect potential artifacts.

bioRxiv · Aug 25, 2015Bioinformatics