Intrahost SARS-CoV-2 k-mer identification method (iSKIM) for rapid detection of mutations of concern reveals emergence of global mutation patterns
Ashley Thommana, Migun Shakya, Jaykumar Gandhi, Christian K. Fung, Patrick Chain, Irina Maljkovic Berry, Matthew A. Conte
The paper introduces iSKIM, a method to detect intrahost mutations in SARS-CoV-2 raw sequencing data, revealing early emergence of mutations associated with variants of concern.
Viruses · Sep 27, 2022Peer-reviewedGenomics