Author

Jeremiah Chilam

Research Institute for Tropical Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Organism:human· 2 Approach:statistical model· 2 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Agnettah M Olorosa· 3 shared Benjamin JeffreyiD· 3 shared Celia CarlosiD· 3 shared Charmian M. Hufano· 3 shared David M. AanenseniD· 3 shared John M. StellingiD· 3 shared June M GayetaiD· 3 shared Khalil Abudahab· 3 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Agnettah M Olorosa

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3 papers

Recent·Most cited

Genomic Surveillance of Acinetobacter baumannii in the Philippines, 2013-2014

Jeremiah Chilam, Silvia Argimón, Marilyn T. Limas, Melissa Masim, June M Gayeta, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, Lara Fides T. Hernandez, Benjamin Jeffrey, Khalil Abudahab, Charmian M. Hufano, Sonia B. Sia, Matthew T. G. Holden, John M. Stelling, , Celia Carlos

This study uses whole-genome sequencing to analyze carbapenem-resistant Acinetobacter baumannii isolates in the Philippines, identifying resistance mechanisms and transmission patterns.

Western Pacific surveillance response journal · Oct 1, 2021Peer-reviewedGenomics

See and Sequence: Integrating Whole-Genome Sequencing Within the National Antimicrobial Resistance Surveillance Program in the Philippines

Silvia Argimón, Melissa Masim, June M Gayeta, Marietta L Lagrada, Polle Krystle V Macaranas, Victoria Cohen, Marilyn T. Limas, Holly Grace Espiritu, Janziel C. Palarca, Jeremiah Chilam, Manuel C Jamoralin, Alfred S. Villamin, Janice B. Borlasa, Agnettah M Olorosa, Lara Fides T. Hernandez, , on behalf of the Philippines Antimicrobial Resistance Surveillance Program

The paper integrates whole-genome sequencing into the Philippines' antimicrobial resistance surveillance program to better understand and track carbapenem resistance in key bacterial species.

bioRxiv · Mar 19, 2020 · PreprintGenomics

Genomic Surveillance of Pseudomonas aeruginosa in the Philippines from 2013-2014

Jeremiah Chilam, Silvia Argimón, Marilyn T. Limas, Melissa Masim, June M Gayeta, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, Lara T. Hernandez, Benjamin Jeffrey, Khalil Abudahab, Charmian M. Hufano, Sonia B. Sia, Matthew T. G. Holden, John M. Stelling, , on behalf of the Philippines Antimicrobial Resistance Surveillance Program

This study sequenced 176 Pseudomonas aeruginosa isolates from the Philippines to characterize their genomic diversity, antimicrobial resistance mechanisms, and clonal spread.

bioRxiv · Mar 19, 2020 · PreprintGenomics