Author

Josh Hinkle

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 1 Organism:human· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Christopher Mullen· 1 shared Fernanda SalvatoiD· 1 shared Gabriel A Goncalves· 1 shared Nivedhitha SelvakumariD· 1 shared Pouya FaridiiD· 1 shared Ralf B. SchittenhelmiD· 1 shared Terry C.C. Lim Kam SianiD· 1 shared Tima ShamekhiiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperImmunology

Christopher Mullen

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1 paper

Recent·Most cited

Beyond HCD: complementary fragmentation chemistries expand HLA class I immunopeptidome discovery

Terry C.C. Lim Kam Sian, Fernanda Salvato, Nivedhitha Selvakumar, Tima Shamekhi, Josh Hinkle, Christopher Mullen, Gabriel A Goncalves, Ralf B. Schittenhelm, Pouya Faridi

This paper evaluates CID and IRMPD fragmentation methods for HLA class I immunopeptidomics, finding they identify unique peptides missed by HCD, especially for non-basic anchor alleles and peptides lacking lysine, arginine, or histidine.

bioRxiv · Sep 30, 2026 · PreprintImmunology